PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT50079.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 198aa MW: 22217.3 Da PI: 9.7962 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.3 | 5.5e-11 | 52 | 97 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+ E+ ++++ + +G+g+W Ia+ + Rt q+ s+ qk+ PHT50079.1 52 NPWTENEQIAFLKGLEFHGKGNWVQIAKDFLPSRTSAQVASHAQKH 97 69***************************999************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MGRRNCTLCG GNGHNQRTCI EKGKSIKLFG VEITTSTVAA MSKIGRKIKK GNPWTENEQI 60 AFLKGLEFHG KGNWVQIAKD FLPSRTSAQV ASHAQKHFMR LDANSNERKY LKKSSVFDLH 120 LEKTEDREHA IVPVETHHVP SFLSNYNMMK VPTVPEVMPV TWVYPYHQYA STSASATTFD 180 NFVSGISSSS KDNLELTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61620.1 | 7e-26 | MYB_related family protein |