PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT49837.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 248aa    MW: 27046 Da    PI: 5.2662
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT49837.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-184089255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  PHT49837.1 40 KYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 89
                8*****998.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MVKTEQKSLT EPSKPSMSLS SSSSTSSSNN NNNMKMKKNK YKGVRMRSWG SWVSEIRAPN  60
QKTRIWLGSY STPEAAARAY DAALLCLKGP SASHNLNFPF DSSFYHHIDH TSTTLSPKAI  120
QRVAAAAAAT AEGGGNQNIG SVSLFDDTNL ILSSPSPPLS SKSTSSSSPL SHADQFDDVC  180
LLPNYSTAAT TATFDQEITA VSMIEQWYNF DSPKYNDMLD GAVFFDPPSM EDIYYEEGSA  240
DIPLWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.17e-31ERF family protein