PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT49666.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 395aa    MW: 46557.3 Da    PI: 9.3137
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT49666.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.61.2e-07189229346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +WT+eE e+  +  k++G++ Wk  a ++g  + + ++k+ w+ 
       PHT49666.1 189 KWTEEEYEIVRKFQKEHGNN-WKVLADELG--KHRFHVKDTWRR 229
                      8*****************99.********9..667778877765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MVTTTFGRLH PRNLTDNRLI RRNLLGNEWP WWNSSNGMTA GRNKIETHRG GPTWXDNGNI  60
KKKKKVKSGH SSEDPTHEKS AKKVRFSGHV QIFPSSDDPS DEKHEIEDEN LLRGKRFSKL  120
EDEIVKEAVH KYVDLHNLGE EGLKKILNSR SYPEIKGCWK EIGSAIPYRP YTAVYYRAQI  180
LFRRSESRKW TEEEYEIVRK FQKEHGNNWK VLADELGKHR FHVKDTWRRI RRPNQNKGQW  240
TQEEYQSLFD LVNTDLRLRL SEEKRSKYGM LRDNIAWTAI SDKLSTRAEA NCCLKWYDQL  300
TSPMVAKGEW ADVDDYRLVD ALFELDASCI EDVDWDNLLD HRPGEICRKR WNQMVLHIGK  360
LKNSSFAEQV EVLAKRYRPD FAEVREAWDN KPVVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-136MYB_related family protein