PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT49594.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 212aa MW: 23274.3 Da PI: 9.8158 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.4 | 1.5e-17 | 21 | 70 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g+++AeIrdp + +++lg+f+ta eAa a++aa+ k++g PHT49594.1 21 HYRGVRKRS-WGKYAAEIRDP-----HrkCQVWLGTFDTAVEAAMAYDAAAIKFRG 70 6*****888.**********6.....336************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MARRHRRTAA ATATAVEKEV HYRGVRKRSW GKYAAEIRDP HRKCQVWLGT FDTAVEAAMA 60 YDAAAIKFRG VKAKTNFPIP VDLTRSPSEV STVESSTAKT KVKKVEVPEE LVIVESSYPP 120 LDLTLGRSSY CLGSKLFSSQ TQNHLDAHGR GRGRGGLNSG EMFHTNRFGS VIMGSDAGDL 180 SETDSSSVVD FMGNDTKDIQ IDLNFPPVPK NK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 7e-24 | ERF family protein |