PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT49593.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 183aa MW: 20046.4 Da PI: 6.1518 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.5 | 9.4e-10 | 21 | 57 | 2 | 42 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeA 42 +y+ Vr ++ +gr++AeIrdp + +++lg+f+ta eA PHT49593.1 21 HYRAVRNRP-WGRYAAEIRDP-----HrkCQVWLGTFDTAMEA 57 689999666.**********6.....336**********8777 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 183 aa Download sequence |
MAHRHRRTAA TTATTVEKEV HYRAVRNRPW GRYAAEIRDP HRKCQVWLGT FDTAMEAGMA 60 PSEVSTVESS TAMTKLKKVE VPEELVIVES SPLPLDLTLG RSSYCLGSKF FSSQTQNHLD 120 AHGGGGDLDR GEIFHTNGFG SVIMGSDAGD LSESDSSSVV DFMDNDTKGI QIDLNFPSVP 180 KKM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G44210.1 | 6e-19 | ERF family protein |