PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT49267.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 151aa MW: 17344.9 Da PI: 9.825 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 52.8 | 5e-17 | 16 | 63 | 2 | 49 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 ie++ ++t+skR++g++KKA+E S+L++a+v v+++ +gk + y PHT49267.1 16 LIEDNEAHTTTLSKRKKGLFKKANEYSTLTGADVGVVLITASGKSHSY 63 6999***************************************99988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MDKRTGKGRQ KIEMKLIEDN EAHTTTLSKR KKGLFKKANE YSTLTGADVG VVLITASGKS 60 HSYGSISIEK ITDKFLELKQ GDRQSDHDDV GKLDVFETFE DLRKEVQALN EKEKERILDK 120 HKLEQLEAIK LWLDKIKKEK KRSCSIQVNQ V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36590.1 | 7e-18 | M-type_MADS family protein |