PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT49101.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ARR-B | ||||||||
Protein Properties | Length: 663aa MW: 73659.8 Da PI: 5.5062 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 92.6 | 3.1e-29 | 212 | 265 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl PHT49101.1 212 KPRVVWSVELHQQFVQAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 265 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 43.8 | 5.8e-14 | 214 | 264 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v+av+qlG + +k+I + m+ g+t++++ s++qky+ PHT49101.1 214 RVVWSVELHQQFVQAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 264 678***********************************************7 PP | |||||||
3 | Response_reg | 75.3 | 2.2e-25 | 32 | 140 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+++l++ +y ev+ +e al +l+e++ +D+++ D+ mp+mdG++ll++ e +lp+i+++a ++++ + + + Ga PHT49101.1 32 VLVVDDDPTCLMILEKMLRNCHY-EVTKSNRAEIALSMLRENRngFDIVISDVHMPDMDGFKLLEHVGLEM-DLPVIMMSADDSKDVVMKGVTHGAC 126 89*********************.***************99999***********************6644.8************************ PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +e+l + PHT49101.1 127 DYLIKPVRIEALKN 140 **********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 663 aa Download sequence |
MNLVASSSVS WKSNSNNSDR VEKNEFPAGL RVLVVDDDPT CLMILEKMLR NCHYEVTKSN 60 RAEIALSMLR ENRNGFDIVI SDVHMPDMDG FKLLEHVGLE MDLPVIMMSA DDSKDVVMKG 120 VTHGACDYLI KPVRIEALKN IWQHVIRKKK HEWKDKDFEQ STNVEDGDQH QKPPEDVDYS 180 SSANEGNWKS SKRRKEEEDE TEERDDTSTL KKPRVVWSVE LHQQFVQAVN QLGIDKAVPK 240 KILELMNVPG LTRENVASHL QKYRLYLRRL SGVSQHQNGL NDSFMGHPEA AYGTMTSFSG 300 LELQALAATG QLPAQSLATF QAAALGRSAT KSAISMPLVD QRNLFSFENP KLRYPEGQQQ 360 LNNSNKQINL LHGIPTTMEP KQLADLHQSS QSFVPMNMQG NARMQQNNAL LMHMSQQQQK 420 QPSRGQMLNE SNNGQVSRPP LSMSQPLSSN GIPAAILSRN GIVDNVRGPV YNPVSQASSM 480 VDFSLNQTTE LQNSFPLVSS NSGMSTLTSK RLIPEEVNSD IKGSRGFPVG YDIFEELHQQ 540 KSQDWGIQNV GSAFGASDHS SIPGTLDVSP SMLVQQGISS MKKNGQNGNS PMGEPQLNLF 600 SGGNLLTVKA EQLPDTSYQS NFLLEQFGQD DLMSAILKQQ ESVGEVETEF GFDGYPPLDN 660 LPV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.2 | 1e-173 | ARR-B family protein |