PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT48689.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRAS | ||||||||
Protein Properties | Length: 786aa MW: 87712.5 Da PI: 5.7302 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 381.7 | 9e-117 | 414 | 783 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 +lL+ cA+av++g+++ a++lL+++++ + p gd mqRla+yf+ +L+ar+a+s++++ykal +++ s ++ l+a++l+ ++P+ ++s + N+ PHT48689.1 414 STLLTLCAQAVAAGNQRTANELLKQIRQSSCPMGDGMQRLAHYFADGLEARMAGSGTHIYKALIARPVS---ATDILKAYHLLLAACPFRTVSSFFSNK 509 57899*************************************************************999...99************************* PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197 +Il+ +e++++vHiiD++i+ G+QWp L+q L+sRp+gpp+lRiTg++ p++g +e++eetg+rLa++Ae+++vpfef++ +a+++e+++le+L+++ PHT48689.1 510 TILNLAEKASTVHIIDIGIMWGFQWPGLIQRLSSRPGGPPKLRITGIDFPNPGfrPAERVEETGRRLANYAESFKVPFEFHA-IAQKWETIKLEDLKIS 607 ****************************************************9*****************************.7*************** PP GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296 +gEal+Vn+ ++ +llde+v ++s+rd +L+l+++l+P+v++ + +n++ F+ rf eal +ys+lfd+lea++pre +er+ vE+ +lg+e++n PHT48689.1 608 KGEALVVNCLFRFRNLLDETVVVNSPRDVFLNLLRRLNPDVFIQGIVNGAYNAPFFVSRFREALFHYSSLFDMLEATIPREMHERMLVEKNILGQEAMN 706 *************************************************************************************************** PP GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 v+acegaer+er et+++W+ r+++aGF+++pl+++++ + + ++++ ++++ +s++l++gWk+r v++S W+ PHT48689.1 707 VIACEGAERIERPETYKQWQIRIMKAGFRQLPLDQEIMRLITEGFKVYDKN-FMIDVDSEWLLQGWKGRFGVALSTWK 783 ***************************************999999999855.*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 786 aa Download sequence |
MGLYEAESAI KLEDEACSFF PDPNLINNLR VSDNLVNRSV DISPFQSDVG PNTLVPSTAD 60 DFHEDYDFGD GALKYINQML MEEDIEEKTC MFQESAALQA AERSFYEVIG EKYPSSANHE 120 KPSSLGQNEP YAVDLSGFNY SGNDGLPCPN WILDLGEDDV SHVSHVPDGV ALHSTSRSSY 180 SPSGTVTDVL VDSPVSTLGI ADIFSDREPI MKFKKGVEET SKLLGVALRS TSVSSHSLSG 240 TATDLPVDSP VSTIRIPDIF SDGESIMQFK KGVEEASKFL PTGNSLLADV RYNVVGKEQY 300 EERKDAVVKF EKYGEKQSPE RSRGKKNTLH EDIVDSTEGR SNKQSAVFSE PTVRSEMFDR 360 VLLCSAGKNE SALRETLQAI SRQNALENGL SKGSNGKKFQ GKKKGRKRDV VDLSTLLTLC 420 AQAVAAGNQR TANELLKQIR QSSCPMGDGM QRLAHYFADG LEARMAGSGT HIYKALIARP 480 VSATDILKAY HLLLAACPFR TVSSFFSNKT ILNLAEKAST VHIIDIGIMW GFQWPGLIQR 540 LSSRPGGPPK LRITGIDFPN PGFRPAERVE ETGRRLANYA ESFKVPFEFH AIAQKWETIK 600 LEDLKISKGE ALVVNCLFRF RNLLDETVVV NSPRDVFLNL LRRLNPDVFI QGIVNGAYNA 660 PFFVSRFREA LFHYSSLFDM LEATIPREMH ERMLVEKNIL GQEAMNVIAC EGAERIERPE 720 TYKQWQIRIM KAGFRQLPLD QEIMRLITEG FKVYDKNFMI DVDSEWLLQG WKGRFGVALS 780 TWKAAY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07530.1 | 0.0 | GRAS family protein |