PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48511.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 266aa    MW: 29380.5 Da    PI: 9.9704
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48511.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.4e-19146196255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f ta+eAa a+++a+ +++g
  PHT48511.1 146 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTFETAQEAAIAYDKAAYRIRG 196
                 8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MNQPISTELP PTNFPAYRRN SSFSRLIPCL TETWGALPLR VDDSEDMVIY GLLKEALNAG  60
WSPFNFPAVE VTPEFMASPA EPTASPAKER YYRGVGWPFS FTAGEVKSKP APGLMTLTAD  120
ATVVPELMAS PAETTKAAAA ALKGKHYRGV RRRPWGKFAA EIRDPAKNGA RVWLGTFETA  180
QEAAIAYDKA AYRIRGTKAH LNFPSQISLN EPEPVRVTAK RRVLHERDSP LENDLVKRKR  240
KNGVSEKCES RSSVEQLTGG HQLLVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1220241KRRVLHERDSPLENDLVKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-60ERF family protein