PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48510.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 280aa    MW: 31762.7 Da    PI: 9.0664
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-19130180255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp   + k +r++lg+f+ta +Aa a+++a+ kl+g
  PHT48510.1 130 RYRGVRQRP-WGKFAAEIRDP---NrKGTRVWLGTFDTAVDAAMAYDRAAFKLRG 180
                 8********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MDTSSLDLIR QHLLDDVVFR ENYCTSSETT STLYSQSSSS SESLESFVSE LKTESNFSFY  60
PESSNLEFSG FFNNNSKMEF NPSEFQAKPQ KKKSFNERKP LLNISIPSVK KTDKPKTGEL  120
KTGENSEKKR YRGVRQRPWG KFAAEIRDPN RKGTRVWLGT FDTAVDAAMA YDRAAFKLRG  180
SKAILNFPLE VSNFKQENNE IEKKVNLNSC GKRAREEIEN EDQVVMKKEV KREQMVATPL  240
TPSSWAPIWD CGNAKGIFEV PPLSPLSPHP SFGFSQLLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.14e-44ERF family protein