PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48285.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 118aa    MW: 13572.2 Da    PI: 9.5013
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48285.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.96.1e-152761844
                     HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                     E+el+++++k+lG++ W++Ia +++ gR+++++k++w
       PHT48285.1 27 EEELILKLHKELGNK-WSAIATRLP-GRSDNDVKNHW 61
                     678899*********.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MRCGKSCRLR WMNYLRPGLK KGNYSPEEEL ILKLHKELGN KWSAIATRLP GRSDNDVKNH  60
WDAHHKKRIR LTNANSSTST EKFTESSSSD SKNEQSCNSD EAGYDMKEVP IQVIYQIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.13e-24MYB family protein