PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT48187.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 592aa MW: 65754.5 Da PI: 8.0744

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT48187.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.7	1.5e-11	435	481	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ +I ++q PHT48187.1 435 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAHITDMQ 481 799*********************66......*************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MTVLWSDEDK TMVAAVLGAK AFDYLMSSLV SAECSLMSMG SNENLQNILS DLVERPNGSN 60 FSWNYAIFWQ ISRSKLGELV LGWGDGCCRE AREGEESEVT RILNLHLEDE AQQRMRKRVL 120 QKLHTFFGGT DEENYLFGLD RVTDTEMFFL ASMYFSFPHG QGGPGKCFGA GKHVWLSDVM 180 KSSVDYCSRS FLMKSAGMQT IVLIPTDVGV VELGSVRAIP ESLELVKSLK SCFSSFSSLG 240 KAKQAASVTV VAEKKDGNNS MFSSSFLRDQ SNGNPKIFGQ NLNSGCAQFR EKLVVRKPVD 300 RPLETYRNGN KGPFMNAQNG VCPVSWASFG NVKPVNSTEL YSPQAPTNNL RNFAVNGTRE 360 EFRLNNLQHQ KHQKPGGMQI DFTNSRPVVY PVHTVESEHS DVEVSCKENH AGPADETRPR 420 KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRAVVPN ISKMDKASLL GDAIAHITDM 480 QKKIRDMESE RGRLGSPNSE TQTRVADINI EAAGDEVIVR VKCPLEIHPL SKVIQVFKEA 540 QANVVESKVA AGNGTVYHTF VVKSSGSELL TKEKLMAAFC GESNSLQPHS HQ

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MTVLWSDEDK TMVAAVLGAK AFDYLMSSLV SAECSLMSMG SNENLQNILS DLVERPNGSN  60
FSWNYAIFWQ ISRSKLGELV LGWGDGCCRE AREGEESEVT RILNLHLEDE AQQRMRKRVL  120
QKLHTFFGGT DEENYLFGLD RVTDTEMFFL ASMYFSFPHG QGGPGKCFGA GKHVWLSDVM  180
KSSVDYCSRS FLMKSAGMQT IVLIPTDVGV VELGSVRAIP ESLELVKSLK SCFSSFSSLG  240
KAKQAASVTV VAEKKDGNNS MFSSSFLRDQ SNGNPKIFGQ NLNSGCAQFR EKLVVRKPVD  300
RPLETYRNGN KGPFMNAQNG VCPVSWASFG NVKPVNSTEL YSPQAPTNNL RNFAVNGTRE  360
EFRLNNLQHQ KHQKPGGMQI DFTNSRPVVY PVHTVESEHS DVEVSCKENH AGPADETRPR  420
KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRAVVPN ISKMDKASLL GDAIAHITDM  480
QKKIRDMESE RGRLGSPNSE TQTRVADINI EAAGDEVIVR VKCPLEIHPL SKVIQVFKEA  540
QANVVESKVA AGNGTVYHTF VVKSSGSELL TKEKLMAAFC GESNSLQPHS HQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein