PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT47994.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 469aa MW: 51444.8 Da PI: 6.699

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT47994.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.9	5.4e-39	106	166	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPryfCk+C+ryWt+GG++rnvPvG+grrknk+ss PHT47994.1 106 PDKILPCPRCNSMETKFCYYNNYNVNQPRYFCKKCQRYWTAGGTMRNVPVGSGRRKNKSSS 166 7899******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MSEVRDPGIK LFGKTIILPN DDLRSSSINT SSHDDQITSE GELTQSKRDD FTNSTADESV 60 EPEISSGISD DPKAQDAYKI TLSPKSTEKD DPNEASGTQD KVLKKPDKIL PCPRCNSMET 120 KFCYYNNYNV NQPRYFCKKC QRYWTAGGTM RNVPVGSGRR KNKSSSTSSY RHIMVSDALQ 180 AARFEAANGM NLPSYRTNGT VLAFGSDKPL CDSMASILNI AEKSHNSIQN GFNGSEQRML 240 ASCGGKEIGN DRSSEACSTT SNSTEKGNDS TARDLAWKNF QAFPPQVHHF PGPPWPYTCN 300 AAPWTSAVPP PTLAPSGFPV SFYPPPPYWS CTMASPWNVP WVSPPSSSAS CSVHGNNPNS 360 PTLGKHSRDE SSFNPSNMAK EDTLQDKDGE RCVLIPKTLR IDDLDEAAKS SMWSTLGIKN 420 DKNDSANGTR LFKAFNTKVD ERNNESDTNL VLQANPAALS RSHNFQEST

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MSEVRDPGIK LFGKTIILPN DDLRSSSINT SSHDDQITSE GELTQSKRDD FTNSTADESV  60
EPEISSGISD DPKAQDAYKI TLSPKSTEKD DPNEASGTQD KVLKKPDKIL PCPRCNSMET  120
KFCYYNNYNV NQPRYFCKKC QRYWTAGGTM RNVPVGSGRR KNKSSSTSSY RHIMVSDALQ  180
AARFEAANGM NLPSYRTNGT VLAFGSDKPL CDSMASILNI AEKSHNSIQN GFNGSEQRML  240
ASCGGKEIGN DRSSEACSTT SNSTEKGNDS TARDLAWKNF QAFPPQVHHF PGPPWPYTCN  300
AAPWTSAVPP PTLAPSGFPV SFYPPPPYWS CTMASPWNVP WVSPPSSSAS CSVHGNNPNS  360
PTLGKHSRDE SSFNPSNMAK EDTLQDKDGE RCVLIPKTLR IDDLDEAAKS SMWSTLGIKN  420
DKNDSANGTR LFKAFNTKVD ERNNESDTNL VLQANPAALS RSHNFQEST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	5e-96	Dof family protein