PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT47679.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 513aa MW: 57733.6 Da PI: 4.3706

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT47679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.3	7.1e-08	256	303	3	47
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 +W++eE+el+ ++v + W+ a +++ R++++++s+++++ PHT47679.1 256 KWSEEEEELFHEVVLSNPASlgknFWNHLAIEFP-SRSREELVSYYFNV 303 8***********6654445555******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MVQKRPFGEE DLYEVSSKQP RCEPSCQLGS VLEHSPLEAY ASGGDEDNSS RTIPDANKKP 60 DSHNVAEVLF SSDKETEMSI HGSASNSSWP TSSTSEEDIM PEAPFHILTS PEYYYFDHPF 120 RASTHHREIH SPLLSNPQKM VPIGPDFQAE LPEWDAYNKD NPCIDGIHET LSPSSQADEN 180 KFAGRTIVLM PKMELLADNV ENIAERGVEC SCEDIGSIRC VRLHNIEARE KLKLALGEET 240 FVRLGFCDMG EVVAEKWSEE EEELFHEVVL SNPASLGKNF WNHLAIEFPS RSREELVSYY 300 FNVFILRKRA EQNRFDPLNI DSDNDEWHET VDDADEGAKM TDEDEDSVVE SPAYYNYLSY 360 NMGHEEHDRP AWEYYNPVNF GSRKVFTDVQ ESCLGKLFDS NSSCKLSMQP QDQGLPNKVV 420 EQEVQGGSCI TGAAGVTSES SLGKTNNNKH WACDIAGTGI GTNHDSLLEP SNRKEWDVGY 480 LSCARNKVDL LPTHTMIEEV FGDGAWIHKS RDV

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MVQKRPFGEE DLYEVSSKQP RCEPSCQLGS VLEHSPLEAY ASGGDEDNSS RTIPDANKKP  60
DSHNVAEVLF SSDKETEMSI HGSASNSSWP TSSTSEEDIM PEAPFHILTS PEYYYFDHPF  120
RASTHHREIH SPLLSNPQKM VPIGPDFQAE LPEWDAYNKD NPCIDGIHET LSPSSQADEN  180
KFAGRTIVLM PKMELLADNV ENIAERGVEC SCEDIGSIRC VRLHNIEARE KLKLALGEET  240
FVRLGFCDMG EVVAEKWSEE EEELFHEVVL SNPASLGKNF WNHLAIEFPS RSREELVSYY  300
FNVFILRKRA EQNRFDPLNI DSDNDEWHET VDDADEGAKM TDEDEDSVVE SPAYYNYLSY  360
NMGHEEHDRP AWEYYNPVNF GSRKVFTDVQ ESCLGKLFDS NSSCKLSMQP QDQGLPNKVV  420
EQEVQGGSCI TGAAGVTSES SLGKTNNNKH WACDIAGTGI GTNHDSLLEP SNRKEWDVGY  480
LSCARNKVDL LPTHTMIEEV FGDGAWIHKS RDV