PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47583.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 320aa    MW: 35339 Da    PI: 9.1088
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47583.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.81.3e-29129189160
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+k
  PHT47583.1 129 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApTCPVKKKVQRSVEDQSILVATYEGEHNHSK 189
                 58***************************99****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MPDKDDQAGD LLEELNRLSA ENKKLTEMLT VMCQNYNALR NQLTEYLNKQ NSTTSTAADN  60
NHDHHSDGSK KRKVENNNNE IVKSVQGLHS ESSSSDEDSS NKKPREEHIK TNTCRVYVKT  120
EASDTSLIVK DGYQWRKYGQ KVTRDNPSPR AYFKCSFAPT CPVKKKVQRS VEDQSILVAT  180
YEGEHNHSKM DGSGPVTTSP SSRLNPKNTL VGANTTTVMP CSSTSIINTP SGPTLTLDLT  240
QPKKLQNDQK KVNSNTSTSN ASGQKSKSPG GHDHHQQNRP GFQQLFIDQM ASSLTKDPSF  300
QAALAAAISG KFLQNNHTDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.14e-86WRKY family protein