PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47500.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 346aa    MW: 38750 Da    PI: 7.2826
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47500.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.6e-19198247255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr ++ +grW AeIrd       r r++lg+f+t+eeAa+a++aa++ l+g
  PHT47500.1 198 SYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTPEEAARAYDAAARWLRG 247
                 69*******.**********32....25**********************97776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MNAEDVLNYP GENDTSFELP TDEQIIESVM ETHKEDEVED DSVELEQVSR KDALKATITL  60
HHFLLQYEKT TPDILNAHNT MYNSHTEFLR KADLFFLPTT QKPHHLNEPT DHQFPHNYNT  120
ANPLDSSFSS KEENEKSPVL EGIAAVVGEH VLFGNNNKNS ENKNHDQISE ESGHAVSILK  180
RTCPAEKSNN NSKNVEKSYR GVRKRPWGRW SAEIRDRIGR CRHWLGTFDT PEEAARAYDA  240
AARWLRGSKA RTNFQIPPVV PLPLVGATSN TSTTSSSSNS SDAEMKKKKK KKNSTGASCA  300
NNKRKCSVVT STAHLFSPTE HQVNHALSKG VSVTVELDLK LGFGKK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1286292KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.11e-26ERF family protein