PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT47476.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 688aa MW: 79952 Da PI: 7.6629

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT47476.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.7	1.7e-22	81	164	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YA+evGF+vr+++s +++++e + + ++Cs +g+++ ++ + r r+etrtgC a++++++ ++++w+v ++ leHnH+l PHT47476.1 81 NYYNCYAREVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVN-----RLRKETRTGCPAMMRMRMVDSKRWRVLEVTLEHNHSL 164 69***************************************9988.....99*******************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MEEASLDSVQ DITVQDSRRF QEIESDGLDD QNSDQIESDE LFVQNGAEME SDDQNCVTDG 60 QKEFVAPAVG MEFESYDDAY NYYNCYAREV GFRVRVKNSW FKRNSREKYG AVLCCSSQGF 120 KRIKDVNRLR KETRTGCPAM MRMRMVDSKR WRVLEVTLEH NHSLGAKVYK SIKKTGVGNK 180 MKLDSNCNAE VRTIKLYRAL VIDAGANRNA NFSASRCKSS SDCHNKLNLR KGDAQAMYNY 240 FCRMQLTNPN FFYLMDLNDE GQLRNVFWID ARSRAAFAYF VDVIYIDNLY LSNKYEIPLV 300 AFVGTNHHGQ SMLLGCGLLA GETKASYAWL FKAWLTCSLG RFPQTIITER CNVLETAISE 360 VFPRSLHRFA LSHIMRKVPE KLGGLRNYDV IRKALIKTIY ESLKPFDFEA AWRFMIQRFG 420 VGDHEWLCSL YNDRAKWAPV YLKDTFFAGM ATARSNETLT AFFDKYVHKQ TPLKEFLDKY 480 ELALQKKFKE EALADIESRN SNPELKTRCS FELQLSNAYT REIFKRFQLE VEEMYSCFST 540 TQLHVDGQVI IFLVKERVLE EGNRREIRDY EVLYNKAAAE VRCICSCFNF YGYLCRHALC 600 VLNFNGVEEI PSKYILSRWK KDYKRLCASD LESSSTESTE QVQWFNQLYR SALQVVEEGM 660 ISLDHYKVAL NAFEESLSRV HHIEEKTK

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MEEASLDSVQ DITVQDSRRF QEIESDGLDD QNSDQIESDE LFVQNGAEME SDDQNCVTDG  60
QKEFVAPAVG MEFESYDDAY NYYNCYAREV GFRVRVKNSW FKRNSREKYG AVLCCSSQGF  120
KRIKDVNRLR KETRTGCPAM MRMRMVDSKR WRVLEVTLEH NHSLGAKVYK SIKKTGVGNK  180
MKLDSNCNAE VRTIKLYRAL VIDAGANRNA NFSASRCKSS SDCHNKLNLR KGDAQAMYNY  240
FCRMQLTNPN FFYLMDLNDE GQLRNVFWID ARSRAAFAYF VDVIYIDNLY LSNKYEIPLV  300
AFVGTNHHGQ SMLLGCGLLA GETKASYAWL FKAWLTCSLG RFPQTIITER CNVLETAISE  360
VFPRSLHRFA LSHIMRKVPE KLGGLRNYDV IRKALIKTIY ESLKPFDFEA AWRFMIQRFG  420
VGDHEWLCSL YNDRAKWAPV YLKDTFFAGM ATARSNETLT AFFDKYVHKQ TPLKEFLDKY  480
ELALQKKFKE EALADIESRN SNPELKTRCS FELQLSNAYT REIFKRFQLE VEEMYSCFST  540
TQLHVDGQVI IFLVKERVLE EGNRREIRDY EVLYNKAAAE VRCICSCFNF YGYLCRHALC  600
VLNFNGVEEI PSKYILSRWK KDYKRLCASD LESSSTESTE QVQWFNQLYR SALQVVEEGM  660
ISLDHYKVAL NAFEESLSRV HHIEEKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein