PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47355.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 344aa    MW: 38849.2 Da    PI: 5.9355
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix75.49.2e-2448138182
    trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 
                 rWt+qe+l+Li++++  ee+  rg+         + +p+W++vs+++r++g  r+p+qC+++w+n+  ++kkik++e++ +  s+s +   
  PHT47355.1  48 RWTRQETLVLIQGKKVAEEKAHRGRrstsifgsdKPEPKWDSVSSYCRRHGADRGPVQCRKRWSNMISDFKKIKTWESQANGSSESYWIIS 138
                 8**************999999987556677777699******************************************9866666666555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MLAQPESPLK QISMTSGSAE MNGNTTPLAN RHQKPTEDGK SKTPRHSRWT RQETLVLIQG  60
KKVAEEKAHR GRRSTSIFGS DKPEPKWDSV SSYCRRHGAD RGPVQCRKRW SNMISDFKKI  120
KTWESQANGS SESYWIISND LRREKRLPGS FDREVYNVLD GKEVSAEACQ LALVTITTDD  180
KFGYGMETVE EEEEEEEEED NDDVSHTGEY TMEDDVLPPV TEEVGSNPLK EGDVKDKKAK  240
SIPSPTPISG TAEGEQPVSD FWNSPMSQKR VKRRRESANG CTDSNLGYKL LKILERNTSM  300
LHAQLDAQIN NHQLDREQRK EHTDSLIAAL NKVTDALARI ADKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-75Trihelix family protein