PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT47315.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 408aa MW: 45315.7 Da PI: 6.0784

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT47315.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.3	5.5e-08	320	360	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L PHT47315.1 320 ARQRRERISERIRVLQRLVPGG-----SKMDTASMLDEAANYLKFL 360 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
QVSMENLDWN ETPDNFGASF DPIHVISNWN MPQRQEAAMR LAADSMAAKS GADPTRNCTE 60 MGFSSSPMLL NIPNYFTDNN NNHPMCLMDD FGVQVVKPGT GLLSNTVSLE SIDCLLSATT 120 TNNTDTSVED DGMSVIFGDS NSLWNSGECS DINATKLSPG YEQLLTCLPT TTDNKIVVEE 180 ENKRKRKHNE LDEVVSQSSL GNSPNEFNLF QSNSLTGGGC RNNYRLISGK QSKCKKPRTT 240 ESNITNNNNK RPSSSNINFQ QATSSASSID QEPDPEAIAQ MKEMIYRAAA FRPVDFGTEV 300 LEKPKRKNVR ISTDPQTVAA RQRRERISER IRVLQRLVPG GSKMDTASML DEAANYLKFL 360 RSQVKALEAI GQKQDPFASL VPFNYPIPMQ LPHYPLLQNP NPIHRPKS

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

QVSMENLDWN ETPDNFGASF DPIHVISNWN MPQRQEAAMR LAADSMAAKS GADPTRNCTE  60
MGFSSSPMLL NIPNYFTDNN NNHPMCLMDD FGVQVVKPGT GLLSNTVSLE SIDCLLSATT  120
TNNTDTSVED DGMSVIFGDS NSLWNSGECS DINATKLSPG YEQLLTCLPT TTDNKIVVEE  180
ENKRKRKHNE LDEVVSQSSL GNSPNEFNLF QSNSLTGGGC RNNYRLISGK QSKCKKPRTT  240
ESNITNNNNK RPSSSNINFQ QATSSASSID QEPDPEAIAQ MKEMIYRAAA FRPVDFGTEV  300
LEKPKRKNVR ISTDPQTVAA RQRRERISER IRVLQRLVPG GSKMDTASML DEAANYLKFL  360
RSQVKALEAI GQKQDPFASL VPFNYPIPMQ LPHYPLLQNP NPIHRPKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	321	326	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	8e-69	bHLH family protein