PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47253.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 377aa    MW: 41523.6 Da    PI: 4.6075
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47253.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-19103152255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++  +++++g
  PHT47253.1 103 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDVEARRIRG 152
                 69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MCGGSIISDY IAPSRTSRRL TAELLWGRAD LSKKLKNLSN YHSKPLRSEV VDDFEADFQD  60
FKEFSYDEDD VEVDVKSFTF SAPKKSTDKD AADRSSKRKR KNQYRGIRQR PWGKWAAEIR  120
DPRKGVRVWL GTFNTAEEAA RAYDVEARRI RGNKAKVNFP DEAPAPASRH SVKLNPQNGL  180
PKESLDSVPS DSTIMNSVGD GYYDSLGFPE EKPMTKQYAY GNGSSASADT GFGSFTPSVG  240
ASAGADIYFN SDVGSNSFEC SDFGWGEPCS RTPEISSVLS AAVESNEAQF VVDANPQKKL  300
KSCTNNPVAD DGNTVNSLSE ELSAYEPQMN FFNLPYMEGN WDASVDAFLN TSATQNAENA  360
MDLWSFDDVP SLMGGVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.31e-72ERF family protein