PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47202.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family TCP
Protein Properties Length: 332aa    MW: 37648.8 Da    PI: 8.7265
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47202.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1419.6e-441132642137
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssaseceaesssssasnsss 87 
                 a+kkdrhski T+ g+RdRR+Rls+e+a++fF Lqd+LGfdk+skt+eWLl+++k ai el++               ss++++ce  s + ++s+ ++
  PHT47202.1 113 AAKKDRHSKINTAHGPRDRRMRLSLEIARKFFNLQDMLGFDKASKTVEWLLTKSKSAINELVQKinkencngttsisASSPSESCEVISGVINESATTN 211
                 78**************************************************************99999888877765555566644444444443222 PP

         TCP  88 g...kaaksaakskksqksaasalnlakesrakarararertrekmriknkln 137
                 +      k+++k+ ks++++  +  +akesr++arararert+ k++++nk+n
  PHT47202.1 212 AtnnVVHKQQKKKVKSTRRTIFHPVVAKESRNQARARARERTKIKNSLNNKNN 264
                 2443333333344555555555789999*******************998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MQPSGNYSPN NSSSSSYFNI DIPSPYMQYE PEFVQYFHDL HFSKPPHDQY NLDTSIMVEE  60
DSNKLDKQEE EDHEELVLKS SKNKKDEMSS TTTSTIRRKN NKCVAGAGAG AGAAKKDRHS  120
KINTAHGPRD RRMRLSLEIA RKFFNLQDML GFDKASKTVE WLLTKSKSAI NELVQKINKE  180
NCNGTTSISA SSPSESCEVI SGVINESATT NATNNVVHKQ QKKKVKSTRR TIFHPVVAKE  240
SRNQARARAR ERTKIKNSLN NKNNIGESMD DDHQSGIQGY NTNNVMNVVD NFNLVDTGNW  300
SPFIFNYHDI NTEISQEHQL MNFQYSGKLW EA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.12e-28TCP family protein