PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47179.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 416aa    MW: 46497.4 Da    PI: 4.4708
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47179.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.11.4e-1599145353
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                  +GVr +k +g+++AeIrdps+    kr++lg+f t e A +a++a r ++
  PHT47179.1  99 PRGVRMRK-WGKYAAEIRDPSQ---GKRIWLGTFETVEAASQAYEAKRAEF 145
                 79****99.**********964...3*******************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
MNVKAVKNVK RERVMEGCIN SVRKVRIIYD DPDATDSESD DDQNENVGRI KRVVKEVVIP  60
CVSCENSFEK CSKIDDVRIQ NSKKIVENKR VQLKPSSLPR GVRMRKWGKY AAEIRDPSQG  120
KRIWLGTFET VEAASQAYEA KRAEFDRTML LEKDKNLSSA GAPAEGSVAC SSRPTNGTNR  180
LESLPSPSSV LDAPTSSAAP VESIDVPAKE MDQMPALETM EDLLFSGCLD FNSGFEDQML  240
NEFVAKAEQG ISRLIEEPLI EQGLKSNCLV EMTEVNIKKQ TKASQQRIEI CKKFTKGIED  300
RSLNCSDKSV LGVLDEPRIM SPSISAELKN VRFEENAATG NDLKLLGFDN NALFDKDPAQ  360
MFDPYTDALG LDSNFLWCYG VDEDFTDDFF EVTSPKLDEV DVRWLDDLLL SDQSTP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.12e-19ERF family protein