PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT47035.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 259aa MW: 28423.7 Da PI: 6.9039 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.5 | 7e-18 | 71 | 119 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+Wv+eIr+p++ + r++lg++ tae+Aa+a++ a+ +++g PHT47035.1 71 YRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAAVSIKG 119 9****998.**********843...6**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MKEVEVVQIS EAESCNSSSS SSSSSSLSTD SMHKSVFDSS KALLEEEKKQ PRKRTKKQRT 60 ATNSESIHKI YRGVRMRSWG KWVSEIREPR KKSRIWLGTY PTAEMAARAH DVAAVSIKGN 120 TAILNFPHLI NFLPRPVSNA PRDVQAAAAK AASMADLSSS CVPSSSSSST SSTTTTSSGS 180 EELCEIIQLP NLEENNYDPK TELRLSDSVE GLLYSPWWST TTTTDGTDFC GYFLEQYAAA 240 AGESFTSCSF ETLKWACQI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 8e-44 | ERF family protein |