PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT46925.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRAS | ||||||||
Protein Properties | Length: 667aa MW: 75211.3 Da PI: 6.2713 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 353.4 | 3.4e-108 | 293 | 663 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 ++lL++cAea ++ + + ++L ++++++sp gd++ Rla yf++AL+ar a+ ++ + ++++ + +e l+a++++ ++P+ ++s++ aN+ PHT46925.1 293 TSLLTRCAEAAATYNSKTFIQVLDKIKQHSSPFGDATARLAYYFANALEARFAG-GD-----ATLATSKRISAAEFLKAYQVYIAACPFKRMSNIFANK 385 689***************************************************.22.....2223333345899************************ PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197 I + ++ + rvHiiDf+i +G+QWp++++ ++ Rp+gpp+lRiTg++ p++g +e++eetg+ L++++++++vpfe+++ +ak++++++le+L+++ PHT46925.1 386 SIAKLTSASPRVHIIDFGILYGFQWPCIIHGISLRPGGPPRLRITGIDFPQPGfrPAERVEETGRHLEEYCKRFNVPFEYKA-LAKKWDEIKLEDLDID 483 ****************************************************9*****************************.6*************** PP GRAS 198 pgEalaVnlvlqlhrlldesvsles...erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293 ++E+l+Vn+ ++l++++de++ ++ +r++vL+l+k+++P+ +v+ +a +n++ F +rf eal ++s+ fd++ea++pre+e r++ E+e++gr+ PHT46925.1 484 RDETLVVNCLYRLKNVHDETAVTHGnknPREAVLNLIKEINPHYFVHGIVNAMYNASFFTTRFREALFHFSSQFDMFEATMPREDEGRMTFEQEVFGRD 582 *****************998766544559********************************************************************** PP GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 i+nv+aceg+er+er e++++W+ r + aGF+++pl+++++k++k+ +++++ + v+e+s+++++gWk+r ++++S+W+ PHT46925.1 583 IMNVIACEGTERVERPESYKQWSVRNQIAGFRQLPLDQDIVKEVKTKVKMFYHADFLVDEDSNWMLQGWKGRIMYALSVWE 663 ****************************************************888*************************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 667 aa Download sequence |
MNTSTHFPSD HRSSDGFEFC HRFALNNNLG IASDQFSRRG GGVGGGGGVN DVFCFTRSMP 60 PSDEELVIGS GSDRTVVEGD YFDGVFKYIQ QMLMEDQDDL ENRPCMFPDC IALQAAEKSF 120 YDVLNPPPVH RDSPHFRDDA VNQFVESTFN ADLDGDQCSL FDASGLNNYH QAGAANSGYV 180 NSSADGVNDQ GVKSNKKHTR EENGDTSKGG NSKQFASNGA EETGDKEAEE HYDKALLCPG 240 MNPSFYENRS KTATSLDDAA WDKQKSSHIK LSKRGRPRGT KNGMKKNEVV DLTSLLTRCA 300 EAAATYNSKT FIQVLDKIKQ HSSPFGDATA RLAYYFANAL EARFAGGDAT LATSKRISAA 360 EFLKAYQVYI AACPFKRMSN IFANKSIAKL TSASPRVHII DFGILYGFQW PCIIHGISLR 420 PGGPPRLRIT GIDFPQPGFR PAERVEETGR HLEEYCKRFN VPFEYKALAK KWDEIKLEDL 480 DIDRDETLVV NCLYRLKNVH DETAVTHGNK NPREAVLNLI KEINPHYFVH GIVNAMYNAS 540 FFTTRFREAL FHFSSQFDMF EATMPREDEG RMTFEQEVFG RDIMNVIACE GTERVERPES 600 YKQWSVRNQI AGFRQLPLDQ DIVKEVKTKV KMFYHADFLV DEDSNWMLQG WKGRIMYALS 660 VWEPIHK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37650.1 | 1e-160 | GRAS family protein |