PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46794.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 225aa MW: 26352.4 Da PI: 6.3657

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.3	2.3e-15	8	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++lv +vk++G ++W+ a+ g++R++k+c++rw +yl PHT46794.1 8 KGPWTEQEDLQLVFYVKMFGDRRWDFLAKVSGLKRSGKSCRLRWVNYL 55 79********************************************97 PP
2	Myb_DNA-binding	56.3	7.1e-18	61	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E++l ++++ ++G++ W++Ia +++ gRt++++k++w++++ PHT46794.1 61 RGKMTPHEEQLVLQLHSKYGNR-WSKIAGKLP-GRTDNEIKNYWRTHM 106 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MVQEEVRKGP WTEQEDLQLV FYVKMFGDRR WDFLAKVSGL KRSGKSCRLR WVNYLNPGLK 60 RGKMTPHEEQ LVLQLHSKYG NRWSKIAGKL PGRTDNEIKN YWRTHMRKLA QDEKKNNKAS 120 ISPSSSNFSN CSSSSANSPA VDSSTEQNEL LQVVEANKTY EEDQNMMVYS MDEIWKEVES 180 SQEIETRNDL PVMASNTWDY CPDSLWMTHD HYYYDNTQDF SFFTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	1e-68	MYB family protein