PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT46790.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 163aa    MW: 18552.3 Da    PI: 9.0386
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT46790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.000217799123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++Cg+ F     L  H+r+H
  PHT46790.1 77 HECSYCGEEFALGQALGGHMRKH 99
                79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MTIKRSKEED LTVETLAMAN CVSILEKNSS LARRFYECKT CKRQFESFQA LGGHRASHKK  60
PKLEKGSDSI KSKTKKHECS YCGEEFALGQ ALGGHMRKHR DKLMEKQEEK NHTKCISDDL  120
LKAEEKSKSN SDKKLFLDLN LTPYENDLML GIIPAFTVVH SLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53600.17e-34C2H2 family protein