PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT46709.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 315aa MW: 35455.8 Da PI: 9.8026 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.1 | 3.5e-07 | 24 | 68 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +WT+ E + + +a +++ ++ +W ++a++++ g++ +++ + PHT46709.1 24 KWTPAENKAFENALALFDKDtpdRWQRVAEMVP-GKSVGDVIRQYK 68 8********************************.***999988875 PP | |||||||
2 | Myb_DNA-binding | 28.3 | 4e-09 | 146 | 184 | 9 | 47 |
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++l++ + k++G+g+W+ I+r + +Rt+ q+ s+ qky PHT46709.1 146 EKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 184 689***********************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MEILSPAPYL ANPSWFLDEG KSTKWTPAEN KAFENALALF DKDTPDRWQR VAEMVPGKSV 60 GDVIRQYKEL EDDVSRIEAG LITIPGYSTS PFTLEWGNSH SFDGYKQTYV VGGKRPLSSR 120 PPEQERKKGA DSIELIIIRV HVKIPEKLFL MGLKKYGKGD WRNISRNFVV TRTPTQVASH 180 AQKYFIRQLS GGKDKRRASI HDITTINLHD NQTSSPDYQK PTSPDQPAVI SQQPKSAANA 240 MHKMPFQWNQ ANNGTAMGFN SAQGSLFMSP LYGGNSYGNN KMQSQSLQRG DLHEPYFGSQ 300 SMNFQLQSAH QYHQA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 1e-91 | MYB family protein |