PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46666.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 606aa MW: 68374.6 Da PI: 6.4096

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46666.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	64.2	2e-20	473	569	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 +kvl++sdv+++gr+vlpkk ae+h +++++ ++ + +ed ++r+W++k++y ++ks++y+l+ ++ +Fv angL+egDf+v++ + +++++++ PHT46666.1 473 QKVLKQSDVGSLGRIVLPKKEAETHlpQLESRDGISIAMEDiGTSRVWNMKYRYwpNNKSRMYLLE-NTGDFVLANGLQEGDFIVIY--ADiKCGKYLI 568 79***********************999999****7778*****777777777777.******************..4558887777 PP E CS B3 95 k 95 + PHT46666.1 569 R 569 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MKREFNELYY GCNKQDVHGF ENINMVPSLD DDHIQSEQQH PTDFDPMDDT DIWLNGNFPT 60 DFTSLQDFPC MSSSSSTSNS LPTESDPSSW AVPKCDTGKD FDTKMDTVGN QECVHVMENL 120 GYMDLVDGDH EFLDPISFFS GESSQENQQQ KGGGDDQKVS IFQGDSELAL MFLEWLKQNK 180 DYISAEDMRS IKLKRSTIES ASRRLGSTKE GKKQLLRLIL DWVEQHRLQK KQMTEAQAIN 240 QMTLQNTAHC NIDPNTCFYP PQWMQGYIIG DPLFAPPFNH TTSVSSSSPA STEYQPMDTC 300 QSWSSSQFTM ATACQYNQFP DNDNTNVDAT DVTDQSRALF STQYTYHLFD GHGERLARLG 360 SCATKEARKN RMARQRRVPS HHFLHQTQNQ RLISNEQSVM MGGQINSCAM SQPNNPGNWV 420 YWPSAAATPI VMVPQADAPQ SLPMERRASQ KHGSTDKKQA CSRTEKNLKF LLQKVLKQSD 480 VGSLGRIVLP KKEAETHLPQ LESRDGISIA MEDIGTSRVW NMKYRYWPNN KSRMYLLENT 540 GDFVLANGLQ EGDFIVIYAD IKCGKYLIRG VKVRPNGAKS DGMQPAKKHV RKTAAVASPP 600 VAQAVR

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MKREFNELYY GCNKQDVHGF ENINMVPSLD DDHIQSEQQH PTDFDPMDDT DIWLNGNFPT  60
DFTSLQDFPC MSSSSSTSNS LPTESDPSSW AVPKCDTGKD FDTKMDTVGN QECVHVMENL  120
GYMDLVDGDH EFLDPISFFS GESSQENQQQ KGGGDDQKVS IFQGDSELAL MFLEWLKQNK  180
DYISAEDMRS IKLKRSTIES ASRRLGSTKE GKKQLLRLIL DWVEQHRLQK KQMTEAQAIN  240
QMTLQNTAHC NIDPNTCFYP PQWMQGYIIG DPLFAPPFNH TTSVSSSSPA STEYQPMDTC  300
QSWSSSQFTM ATACQYNQFP DNDNTNVDAT DVTDQSRALF STQYTYHLFD GHGERLARLG  360
SCATKEARKN RMARQRRVPS HHFLHQTQNQ RLISNEQSVM MGGQINSCAM SQPNNPGNWV  420
YWPSAAATPI VMVPQADAPQ SLPMERRASQ KHGSTDKKQA CSRTEKNLKF LLQKVLKQSD  480
VGSLGRIVLP KKEAETHLPQ LESRDGISIA MEDIGTSRVW NMKYRYWPNN KSRMYLLENT  540
GDFVLANGLQ EGDFIVIYAD IKCGKYLIRG VKVRPNGAKS DGMQPAKKHV RKTAAVASPP  600
VAQAVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-116	B3 family protein