PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46479.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 873aa MW: 99348.3 Da PI: 6.513

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	34.6	6.3e-11	64	132	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+eYA+++GF++r+ + ++ k +f C k g r+ + ++ C+a+l+v+++ ++kw+vtk ++eH+H+l+ PHT46479.1 64 NFYDEYARRLGFTTRVCQFNRL-------KTDFLCDKVGLRRVSGES--------------CDAMLRVELKGQNKWVVTKYVKEHSHSLV 132 6**************98876.......789*****998877..............************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 873 aa Download sequence
MNVEVIDVEE VKMHQQGGIA DDGDDEPSES GEANVNGRSN ASDGDSIVEP QMGMIFLSED 60 QAKNFYDEYA RRLGFTTRVC QFNRLKTDFL CDKVGLRRVS GESCDAMLRV ELKGQNKWVV 120 TKYVKEHSHS LVYPNKVHYQ RLHKHFAVTK KNVTENNQGV GLVPSGVMYV SVDGNRIPVE 180 MNHGAKRTRP DESDQTVQNT ALQSFSPRHC NQRRTLGRDA QNLLDYFKKM QAENPGFYYA 240 IQLDEDNRMA NVFWADARSR NAYSHFGDAV ILDTMYRVNQ CRVPFAPLTG VNHHGQTILF 300 GCALLLDESE ATFVWLFKTF LAAMNDRAPV SIITDHDTVI QSAVAQVFPE TRHRINKWNV 360 LRGGQDRMAH VCHMYPNFQV ELYNCINLTD TVEEFETYWE IILEKYDLKK NDWLQSIYNI 420 RHQWVPVYFR DTFVAAISPN QEYECSFFDG YVNQQITLPL FFRQYERALE NSLEKETEAD 480 FDTICTTPPL RTPSPMEKQA ATVYTKKIFL KFQEELVETF VYTANRIDGD GVISTFRVAK 540 FEDDQKAYIV SLNISELKAN CSCQMFECSG ILCRHILTVF TVNNILTLPS HYILKRWTIN 600 AKCGAESAEQ VHGTESMAQR YNSLCREAIR YAEDGAVSQE AYNAALGALK EGGKKVAFAK 660 RNVTKVSPPN SLVSGAGYDD RRTSISASEM TPLLWPRQDE MTKRFNLNDT GSPARAVADL 720 NAQRMAPVSL HHDDGHADNT VILPCLKSMT WVMENKTSAP ENRVAVINLK LQDYSRTPSR 780 ESEVKFQLSR ITLEPMLKSM AYISEQLSAP ANRVAVINLK LQDTETTSGE SEVKFQVSRD 840 TLSAMLRSMA YIREQLSNTV ESQLEIPAKK QRR

Sequence ? help Back to Top

Protein Sequence Length: 873 aa Download sequence

MNVEVIDVEE VKMHQQGGIA DDGDDEPSES GEANVNGRSN ASDGDSIVEP QMGMIFLSED  60
QAKNFYDEYA RRLGFTTRVC QFNRLKTDFL CDKVGLRRVS GESCDAMLRV ELKGQNKWVV  120
TKYVKEHSHS LVYPNKVHYQ RLHKHFAVTK KNVTENNQGV GLVPSGVMYV SVDGNRIPVE  180
MNHGAKRTRP DESDQTVQNT ALQSFSPRHC NQRRTLGRDA QNLLDYFKKM QAENPGFYYA  240
IQLDEDNRMA NVFWADARSR NAYSHFGDAV ILDTMYRVNQ CRVPFAPLTG VNHHGQTILF  300
GCALLLDESE ATFVWLFKTF LAAMNDRAPV SIITDHDTVI QSAVAQVFPE TRHRINKWNV  360
LRGGQDRMAH VCHMYPNFQV ELYNCINLTD TVEEFETYWE IILEKYDLKK NDWLQSIYNI  420
RHQWVPVYFR DTFVAAISPN QEYECSFFDG YVNQQITLPL FFRQYERALE NSLEKETEAD  480
FDTICTTPPL RTPSPMEKQA ATVYTKKIFL KFQEELVETF VYTANRIDGD GVISTFRVAK  540
FEDDQKAYIV SLNISELKAN CSCQMFECSG ILCRHILTVF TVNNILTLPS HYILKRWTIN  600
AKCGAESAEQ VHGTESMAQR YNSLCREAIR YAEDGAVSQE AYNAALGALK EGGKKVAFAK  660
RNVTKVSPPN SLVSGAGYDD RRTSISASEM TPLLWPRQDE MTKRFNLNDT GSPARAVADL  720
NAQRMAPVSL HHDDGHADNT VILPCLKSMT WVMENKTSAP ENRVAVINLK LQDYSRTPSR  780
ESEVKFQLSR ITLEPMLKSM AYISEQLSAP ANRVAVINLK LQDTETTSGE SEVKFQVSRD  840
TLSAMLRSMA YIREQLSNTV ESQLEIPAKK QRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein