PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT46476.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 398aa    MW: 43479.4 Da    PI: 5.1209
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT46476.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding331.4e-1098142347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT eE+  ++++ + +G g+W++Iar    +Rt  q+ s+ qky
       PHT46476.1  98 AWTVEEHRSFLRGLAIYGRGDWRSIARNCVITRTSMQVASHAQKY 142
                      7**************************99989************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MSTDQICNST FWTKEEEKVF ETTLAIYFKG GDLLTKMEEA LPCKSRDDII NHYKILIEDV  60
DAIESGRVPL PNYPELPSHS NQKSRFPKTN LARRKGVAWT VEEHRSFLRG LAIYGRGDWR  120
SIARNCVITR TSMQVASHAQ KYFNRLKAVN KENRRMSIHD ITIVDAEVAG TSQVPYTEGM  180
IWPACGGSQA VACTSNQNML PPESTNAEQM IAVAGGESSG HTAAFVSGMN SMSDEDDFIL  240
HIDDLIVDPE DANESEILVD GGKSLLPSKQ PCTADSSGSN NHPIFRVGSE LGALITKQMD  300
EDYDFFSIFD DGEAPISHAM VSNAAHSGMT SFAVASNSAN NPPQNTVSAH SGRTSFAAAS  360
TGPNNAPLNM VSDHPQSPHV APSSNCVVGE WLQFKYYH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.19e-46MYB family protein