PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT46404.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family DBB
Protein Properties Length: 233aa    MW: 25922.5 Da    PI: 4.6765
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT46404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box186.1e-06443538
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                 C+ +e+ +++  C  ++  lC++C  e H        H+
  PHT46404.1  4 QCDVCEKAQATVICCADEAALCAKCDIEVHAAnklaskHQ 43
                7******99*********************6566666665 PP
2zf-B_box28.63e-095395238
    zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                + + C+ +++k + +fC +++ l+C+dC +++H+       H+
  PHT46404.1 53 KLPPCDICQDKAAFIFCVEDRALFCKDCDEAIHSAsslaknHQ 95
                6789*****************************6556666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MKIQCDVCEK AQATVICCAD EAALCAKCDI EVHAANKLAS KHQRLHLQCL SNKLPPCDIC  60
QDKAAFIFCV EDRALFCKDC DEAIHSASSL AKNHQRFLAT GIRVALSSSC NKDAVKSQLE  120
PQPPQQNTQQ VGLKMPPQQL SSITSPSWPV DDLLGFPDYE SSDKKELLEL GEFEWLGGID  180
LFGEQTAAEV PELSVPQSNN TNIYRPTKYN MPYKKPRIEM PDEDEYFTVP DLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06040.13e-87DBB family protein