PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46217.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 622aa MW: 68739.5 Da PI: 7.4159

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46217.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96	2.5e-30	270	329	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+ PHT46217.1 270 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApNCPVRKQVQRCAEDMSILITTYEGTHNHT 329 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MENKSKAEYY SPDDEDQENI IHKFGKGRKE REDDKSKPSS PHHKDFMAID NNIKGVAVNV 60 MVKRERSPPE LNSMASSSTH KEKDDQLALA KVEMREVMEE NQRLRFHLDR IMKEYRNLQN 120 QFHDIVQREV DQKSSSTVNT AQHESDHETN ELVSLSLGRA TSDMKKEELS KILKKDKGRD 180 DEDVNKSLDL GLDCKFEECA PVKNRSPENS LDVHQANKDE NGETSTTTWP PNKNLKTMRN 240 DGDNGDDVSQ QNPTKRARVS VRVRCDAPTM NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP 300 NCPVRKQVQR CAEDMSILIT TYEGTHNHTL PLSATAMAST TSAAANMLLS GSSSSSDPSP 360 QITATTTNTA TATTSANING LNFYISDTSK HKSPFYFPNS SISASTPNNS HPTITLDLTS 420 TSSSSSSSLS HLNRMSNNLH PRYNYNNSST NLNFSSVLES NSLPISWTNY QNQTCNKNNQ 480 NFGSLNFSSR PNQENIFQSY LQKNNNIIPT ESSFPPDTIA AATKAITSDP NFHSALAAAL 540 TSIIGNTGIE NKPGHNFNVS EPFPVLSSLP SSSNPNKCSS SFLNKPTSSS ANNSSQQPGN 600 NNNNNLVFFA QSSSSSLPFS TS

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MENKSKAEYY SPDDEDQENI IHKFGKGRKE REDDKSKPSS PHHKDFMAID NNIKGVAVNV  60
MVKRERSPPE LNSMASSSTH KEKDDQLALA KVEMREVMEE NQRLRFHLDR IMKEYRNLQN  120
QFHDIVQREV DQKSSSTVNT AQHESDHETN ELVSLSLGRA TSDMKKEELS KILKKDKGRD  180
DEDVNKSLDL GLDCKFEECA PVKNRSPENS LDVHQANKDE NGETSTTTWP PNKNLKTMRN  240
DGDNGDDVSQ QNPTKRARVS VRVRCDAPTM NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP  300
NCPVRKQVQR CAEDMSILIT TYEGTHNHTL PLSATAMAST TSAAANMLLS GSSSSSDPSP  360
QITATTTNTA TATTSANING LNFYISDTSK HKSPFYFPNS SISASTPNNS HPTITLDLTS  420
TSSSSSSSLS HLNRMSNNLH PRYNYNNSST NLNFSSVLES NSLPISWTNY QNQTCNKNNQ  480
NFGSLNFSSR PNQENIFQSY LQKNNNIIPT ESSFPPDTIA AATKAITSDP NFHSALAAAL  540
TSIIGNTGIE NKPGHNFNVS EPFPVLSSLP SSSNPNKCSS SFLNKPTSSS ANNSSQQPGN  600
NNNNNLVFFA QSSSSSLPFS TS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	4e-62	WRKY family protein