PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46178.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 653aa MW: 72311.9 Da PI: 8.9523

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46178.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.9	0.00043	278	295	2	19
HHHHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsa 19 r +h++ E+rRR++iN++ PHT46178.1 278 RSKHSATEQRRRSKINDR 295 889*************96 PP
2	HLH	23.5	9.9e-08	324	356	19	55
HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 f +Lre++P++ ++K +Ka+ L +++eYI+ Lq PHT46178.1 324 EFLRLREIIPHS----DQKRDKASFLLEVIEYIQFLQ 356 5889*****9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MELPQSRTFG TEGRKTTHDF LSLYSPIEQD PRPMQGGYVK THDFLQPLEQ ARKTIGKEEN 60 KVEVEAVENP PSAEHILPGG IGTYSISYLQ QRVPKPEAST FAIAQASSTD RDDRNSNCSS 120 YSGSGFTLWN ESTMKNGKTG KENLAGDRHV IREAGVNIGG GKPTTSLERQ SQFSSNHNHN 180 TATLSSHSSP QQPSAMDNQS FIHMITSARN AQEDNDDEEE EFVVKKESPS PSRGLPSDNC 240 FPQKSESVIY NRRITTCIGN LSVKVDGKNS DQKPNTPRSK HSATEQRRRS KINDRHVTTI 300 ILSFEKRKGK VFDVMTILGG RGSEFLRLRE IIPHSDQKRD KASFLLEVIE YIQFLQEKVH 360 KYEGSYQGLE NKPSTLPWLG LLGQIIKILS SRYVVQLAHA RIDDWRVVFG IVPCLCVCNA 420 IYVAFGVNKN KFNSMAQGLI DHSQGTNSAS SHALIHAAQF DENKIGISAT GPVNGQTLEP 480 KRTSSVKERG QLSELTNKAT TLCMQPNTFP FCANTSIASL QSTMAPDAVT LELKSQPQFS 540 LSRSNVTNYA VTDHKLKGQE MSIESGTVSI SSIYSQRLLN TLKQALQKSG VDLLQANMSV 600 QIDLAKRAND RSNASASNFK DDNISSNNQP TSQSIHTSTR DESVHTFKRL KTN

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MELPQSRTFG TEGRKTTHDF LSLYSPIEQD PRPMQGGYVK THDFLQPLEQ ARKTIGKEEN  60
KVEVEAVENP PSAEHILPGG IGTYSISYLQ QRVPKPEAST FAIAQASSTD RDDRNSNCSS  120
YSGSGFTLWN ESTMKNGKTG KENLAGDRHV IREAGVNIGG GKPTTSLERQ SQFSSNHNHN  180
TATLSSHSSP QQPSAMDNQS FIHMITSARN AQEDNDDEEE EFVVKKESPS PSRGLPSDNC  240
FPQKSESVIY NRRITTCIGN LSVKVDGKNS DQKPNTPRSK HSATEQRRRS KINDRHVTTI  300
ILSFEKRKGK VFDVMTILGG RGSEFLRLRE IIPHSDQKRD KASFLLEVIE YIQFLQEKVH  360
KYEGSYQGLE NKPSTLPWLG LLGQIIKILS SRYVVQLAHA RIDDWRVVFG IVPCLCVCNA  420
IYVAFGVNKN KFNSMAQGLI DHSQGTNSAS SHALIHAAQF DENKIGISAT GPVNGQTLEP  480
KRTSSVKERG QLSELTNKAT TLCMQPNTFP FCANTSIASL QSTMAPDAVT LELKSQPQFS  540
LSRSNVTNYA VTDHKLKGQE MSIESGTVSI SSIYSQRLLN TLKQALQKSG VDLLQANMSV  600
QIDLAKRAND RSNASASNFK DDNISSNNQP TSQSIHTSTR DESVHTFKRL KTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	2e-67	bHLH family protein