PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT46163.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 126aa MW: 14862.6 Da PI: 8.4191 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 35.1 | 3e-11 | 72 | 116 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + + + +g+W++I+r + Rt+ q+ s+ qky PHT46163.1 72 PWTKEEHRLFLLGLETYWKGDWRSISRNIVISRTPSQVASHAQKY 116 8*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence |
MVPNKTIDEL KQHYQLLVDD VTAIEYGYVP IPNYTVEENS YGYSRVSRDD WQSNGNEFAE 60 TAQCPERRKG TPWTKEEHRL FLLGLETYWK GDWRSISRNI VISRTPSQVA SHAQKYFNRL 120 KKNQHP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 1e-43 | MYB family protein |