PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT46088.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 255aa    MW: 27983.8 Da    PI: 6.638
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT46088.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.10.000181501861455
                 HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  PHT46088.1 150 EKLGDRITSLHQLVSPF-----GKTDTASVLSEAIGYIRFLQ 186
                 66778889999999887.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MVEKTCVRSE FSGDEEKFGI SPFHEAGNSE DQSLNSVHPT SSSSVATNFR VPVADVKPEL  60
GQLYDYHRHQ HHHHHVHNEF QTSSLQEKLE LATDHFTRPL ASNWSQQDLP SPASSCITTG  120
LSHNLLNFSN SKGEHKHQHP DHNSTEVRKE KLGDRITSLH QLVSPFGKTD TASVLSEAIG  180
YIRFLQAQIQ ALSSPYLGNA SGSMGHIPQQ SVNDSQHKPT DLRSRGLCLV PISCMANVGS  240
DTGADYWAPA LGGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.15e-44bHLH family protein