PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT45950.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 502aa MW: 54778.2 Da PI: 4.9635

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT45950.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.2	4.6e-11	314	356	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++P + K++ a+iL A+eY+k+L PHT45950.1 314 MAERRRRKKLNDRLYMLRSVVPRiS------KMDRASILGDAIEYLKEL 356 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MQSKEEEEEG INKEKNINGV VENKEDMEMG SLSTFKSMLQ GTDVEWYMSN NNMQNQNENA 60 TSICFTQNFT ELAETENSLF LQLPLPVDSS SSCPPASASV FNNLEPSQLH YFLAQKSINN 120 NNPLDYGFLE AQGLSEGGFL ASGFHDLSSQ NPNLTSFTQY PLSHLPQNSG ASTGFSPLGF 180 IDGCANESSM FVRSKLLKPL DNFASIGAQP TLFQKRAALR KNLGDTNGGN LGDLGGQIGQ 240 NEGKRKWGSG EELDDVSFDG GCTLSYDSDD LGENVTNKVD DSVKNGGNVS NVTSSAVDGN 300 QKGKKKGLPA KNLMAERRRR KKLNDRLYML RSVVPRISKM DRASILGDAI EYLKELLQKI 360 NDLHNELEST PPSSSLSQTT SFYPLTPTAP GLPGRIKEEV YPSSFASPLS SPTGQPARVE 420 VKARDGRAVN IHMFCSRRPG LLLSTMRALD NLGLDIQQAV ISCFNGFALD IFRAEQCKEG 480 QDFHPDQIKA VLLDSAGCHG MI

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MQSKEEEEEG INKEKNINGV VENKEDMEMG SLSTFKSMLQ GTDVEWYMSN NNMQNQNENA  60
TSICFTQNFT ELAETENSLF LQLPLPVDSS SSCPPASASV FNNLEPSQLH YFLAQKSINN  120
NNPLDYGFLE AQGLSEGGFL ASGFHDLSSQ NPNLTSFTQY PLSHLPQNSG ASTGFSPLGF  180
IDGCANESSM FVRSKLLKPL DNFASIGAQP TLFQKRAALR KNLGDTNGGN LGDLGGQIGQ  240
NEGKRKWGSG EELDDVSFDG GCTLSYDSDD LGENVTNKVD DSVKNGGNVS NVTSSAVDGN  300
QKGKKKGLPA KNLMAERRRR KKLNDRLYML RSVVPRISKM DRASILGDAI EYLKELLQKI  360
NDLHNELEST PPSSSLSQTT SFYPLTPTAP GLPGRIKEEV YPSSFASPLS SPTGQPARVE  420
VKARDGRAVN IHMFCSRRPG LLLSTMRALD NLGLDIQQAV ISCFNGFALD IFRAEQCKEG  480
QDFHPDQIKA VLLDSAGCHG MI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	304	322	KKKGLPAKNLMAERRRRKK
2	316	323	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-109	bHLH family protein