PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT45790.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 121aa MW: 14128.6 Da PI: 10.7269 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 49.2 | 9.2e-16 | 28 | 75 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +ahn+ Err RdriN ++ L++l+P+a K +Ka++Le++++Y+k+Lq PHT45790.1 28 AAHNQSERRHRDRINGKMKALQKLVPNA-----SKTDKASMLEEVIKYLKQLQ 75 69*************************9.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
MDDLLQENKK EERETKSSNL SKRSRRVAAH NQSERRHRDR INGKMKALQK LVPNASKTDK 60 ASMLEEVIKY LKQLQAHVQL ITSARNMEQQ MMMMSLGMQP HIQMPLLARM AWVVLQECLT 120 I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00050.1 | 6e-26 | bHLH family protein |