PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT45526.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GATA | ||||||||
Protein Properties | Length: 537aa MW: 59510.6 Da PI: 8.1222 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 36.1 | 8.7e-12 | 7 | 34 | 8 | 35 |
GATA 8 kTplWRrgpdgnktLCnaCGlyyrkkgl 35 TplWR+gp ++ LCnaCG ++r kg+ PHT45526.1 7 GTPLWRNGPPEKPILCNACGSRWRTKGT 34 5********66666***********997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 537 aa Download sequence |
MSKYAAGTPL WRNGPPEKPI LCNACGSRWR TKGTLLNYTP LHARPESDDL EDYRMSRIKN 60 MSLKSKEAKV LKQKQNYDNT VVKTPDYNQG FLKGLDEDTS NRSSSGSAIS NTESSAQFGS 120 TEASDLTGPA QSNKWEAMVP SRKRTCISRS KQSSVEKLTK DLCTILHEQQ SSYFSGSSEE 180 DLLFESHKPM VSVEIGHGSV LIRHPNSIGR EEESEASSLP VNNKLHNVNE AYSRLSTPPV 240 NINRGVNLPN LGTERTKKSN SQGMEQQQIK RDKDHFEKLH ILGHHSSPLC HIDLKDVLNY 300 EEFVRHFSSD ERQQLLKYLA PVDSFAPPDS LKSMFESSHF EENLSSFQKL LAEGVFDSSL 360 SGVTIQDSRT LKRLILCYLT KSKWVEKYNL LKDTKCRSST SGSEVAGGAN AIGTGLSVNV 420 KRPLEGHHPT HTDHFASGAK KAMKSPKKVV TNSSYEQKEL VDNNSSCFSP KCLFPLPSNS 480 SPVLDSLRFE NDQDVLLDVP SSSSFAQAEL LLPTSSFAAQ ASTSSSSVYP HLVRPSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.2 | 1e-130 | GATA family protein |