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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | PHT45266.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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| Family | HSF | ||||||||
| Protein Properties | Length: 335aa MW: 38708.2 Da PI: 4.7422 | ||||||||
| Description | HSF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HSF_DNA-bind | 113.8 | 1.1e-35 | 33 | 125 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98
Fl+k+ye+++d++ ++++sws+ +nsf+v+d++++a ++Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++ weF+h+ F +gkk+ll++i+
PHT45266.1 33 FLTKTYELVDDPSSNDVVSWSRGNNSFIVWDPQSLAINLLPRYFKHNNFSSFVRQLNTYGFRKVNPDH---------WEFAHEGFLRGKKHLLKTIR 120
9*****************************************************************99.........******************** PP
XXXXX CS
HSF_DNA-bind 99 rkkse 103
r++ +
PHT45266.1 121 RRRAT 125
*9875 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 335 aa Download sequence |
MDHFGNSIKE EFDGSFSRPR PLEGLHESGP PPFLTKTYEL VDDPSSNDVV SWSRGNNSFI 60 VWDPQSLAIN LLPRYFKHNN FSSFVRQLNT YGFRKVNPDH WEFAHEGFLR GKKHLLKTIR 120 RRRATNNFIK SSSSSSSQGM DSSSSSCVEL GSFGSFDEEI DRLRCDKQVL MIELVKLKQH 180 QKTTNSHLQA MEQKLAGTEM KQQQMMNFLA KALQNPNFVG QIMQQKDKRK ELEEAIKKKR 240 RRPIDQGPSN IKLEPQDFGD DDYINNEFDD DLEVAMNMQL EEDRYVEYMG NIELGGDNEG 300 LWEDMLNENV EDEIMALLGT DQQEDDQVHV DILSE |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 110 | 123 | RGKKHLLKTIRRRR |
| 2 | 228 | 242 | KRKELEEAIKKKRRR |
| 3 | 237 | 242 | KKKRRR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G22830.1 | 1e-109 | HSF family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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