PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45137.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 607aa    MW: 66601.1 Da    PI: 5.4229
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45137.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS345.96.5e-1062406063373
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 + ++e+A+a+++g+++ a  +L+rls+ a  +g++ qRl+ay++ AL++r++          pp   +  +s+e++ + + ++e+sP++k+++++aN a
  PHT45137.1 240 QSIVEAATAITDGKTNVAVDILTRLSQVADIRGSSEQRLTAYMVSALKSRVNF------TEYPPPVLE-LQSKEHAISAQNLYELSPCFKLGFMAANLA 331
                 6789************************************************8......223333332.348888888899****************** PP

        GRAS 102 Ileavege..ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 Ileav  +  +++H+iDfdi+qG+Q++ Ll+aLas++ ++p sl+iT++ +      ++++ +g+ L+ +A+++gv + fnv ++ +++dl+ e+L v+
  PHT45137.1 332 ILEAVVDQpsDKIHVIDFDIGQGGQYLHLLHALASKKtDEPTSLKITAITDFMGRADDRVNLIGDDLRTLADKIGVCLVFNV-TSCKITDLSREKLGVE 429
                 *****99989************************99845566*********8777**************************9.899************* PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++E+laVn++++l+rl+desv++e+ rde+L+ vk+lsPkvv++veqe++ n++ F++r+ ea  yy al+dsl+a++++++  r+k+E+  l+r++vn
  PHT45137.1 430 HDETLAVNFAYRLYRLPDESVTTENLRDELLRRVKGLSPKVVTLVEQELNGNTAAFVARVNEAYGYYGALLDSLDATVSKDEMGRAKIEEG-LSRKVVN 527
                 *******************************************************************************************.******* PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaW 373
                  vaceg++r+er+e ++kWr+r+++aGF+p p+s+++a++    l+  +  + g++v+e+sg +++gW++++L+++SaW
  PHT45137.1 528 SVACEGRDRVERCEVFGKWRARMSMAGFGPRPMSQYIADSLLKRLNSDPrgNPGFTVNEQSGGICFGWMGKTLIVASAW 606
                 ************************************999987777666557899************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    
MSSDYSGGVP EFYGGAGGIN TGRSTMIPMN HAQRSPLSGI LPEGAYQNLH RRQTFIGKRS  60
LADFQQQQQQ VQQGLGFYLR NVKPRSYQQA SPISPLVDFS SEFPSVSPIS VMNTRHALPI  120
IQTLRSQPVI PPANTNASEV LSSGNLNCSA VASYLNQVQN SLYQESEEKM MNRLQELEKE  180
LLEDSYGDEE DTGSIVTNNN EWSETIKNLI TPSSNHLSPA SSTSSCSSSI ESPTITSPKQ  240
SIVEAATAIT DGKTNVAVDI LTRLSQVADI RGSSEQRLTA YMVSALKSRV NFTEYPPPVL  300
ELQSKEHAIS AQNLYELSPC FKLGFMAANL AILEAVVDQP SDKIHVIDFD IGQGGQYLHL  360
LHALASKKTD EPTSLKITAI TDFMGRADDR VNLIGDDLRT LADKIGVCLV FNVTSCKITD  420
LSREKLGVEH DETLAVNFAY RLYRLPDESV TTENLRDELL RRVKGLSPKV VTLVEQELNG  480
NTAAFVARVN EAYGYYGALL DSLDATVSKD EMGRAKIEEG LSRKVVNSVA CEGRDRVERC  540
EVFGKWRARM SMAGFGPRPM SQYIADSLLK RLNSDPRGNP GFTVNEQSGG ICFGWMGKTL  600
IVASAWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-150GRAS family protein