PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45114.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 267aa    MW: 30831.7 Da    PI: 7.2058
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45114.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.32e-1187139155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 ++++h e+Er+RR+++ + ++ Lr+ lP  +    ++K s ++    A +YI +Lq
  PHT45114.1  87 KKVMHREIERQRRQEMSTLYACLRQQLPLeN---IKGKRSTSDHILVAANYIEQLQ 139
                 6899*************************66...*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MDNFHSMFPL QQDDDANDSH RQLFFPHPEP YTNPSNFIYQ EDLVTDFAPF DSLELGDNNL  60
RFNNNNNQRG NRLQKWSVTS TEENKQKKVM HREIERQRRQ EMSTLYACLR QQLPLENIKG  120
KRSTSDHILV AANYIEQLQK NVKHLEERRE KLKKESIGLS NLDYPKSGSS STSNSSPATI  180
VTVKECLDGM EILVNCCLKK EGFRLSRVLQ VLLQEGLSIV NCSCTKTNSK SVLHTIRTEV  240
EDRIRINADS IQQKLTDIIH SDDTSFK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148155RREKLKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12540.12e-27bHLH family protein