PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT44944.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 326aa    MW: 36091.7 Da    PI: 7.1755
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT44944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.61.8e-21127182258
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                 +Dgy+WrKYGqKe+ gs+fpr    Ct++   +Cp+kk+v+r ++dp v+e+tY+++H +
  PHT44944.1 127 EDGYTWRKYGQKEILGSRFPR----CTHQklyHCPAKKQVQRLDNDPYVFEVTYRSQHIC 182
                 7*******************6....99998999*************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MQNAKPVSTP LAAHFKLLAT LSPKTDDERD YMPRVPYSSA AESLMYAIVC SRPDLSYAAS  60
AVSRYMANCS KEHWKTVQRI FRFLHGSADV CLQFGRNRDV VIEMGDTDRR TVRVAAPRMG  120
NLELPPEDGY TWRKYGQKEI LGSRFPRCTH QKLYHCPAKK QVQRLDNDPY VFEVTYRSQH  180
ICYMSATAPT VPPPSVEEIT HQTTTTPPPL LPLPPPTSAS LSGQWLSMDI KPQVEAGTSY  240
TTAQFDIQRD FGHASGGSLT SICNVVTACV GGGAGPSGSR FGREVDYQPV VDMADAMFNS  300
GSSSNTSMDI IFSSIDDKWD TTQKNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.11e-37WRKY family protein