PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT44708.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 320aa    MW: 36205.3 Da    PI: 9.637
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT44708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.21.4e-1312762599
                TT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 25 eh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                +h +g    +++  +  + g++W+vk+  +++    +l++GW +Fv++++L+ gD ++F+++g +ef   v++f++
  PHT44708.1 12 KHlKG---INQEHAILRRAGKKWRVKV--NGR----LLGEGWAKFVEEHDLQLGDLLIFRHEGAMEF--EVSIFDS 76
                34333...3345677789*********..555....6***********************9999999..9999986 PP
2B3474.8e-15154233487
                 E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 + +++++  +++++lp  fa+ +g+  ++  +++l+de+ rsW+v+l     + r+ +t+GW++F +an ++ gD+  F+l+++
  PHT44708.1 154 TIIKPYAVIRALVYLPSAFARPNGLMRRC--KMILRDEKQRSWSVQL--GSVGPRFGITRGWRQFREANAVQLGDTYKFELIDN 233
                 566888888999***********999766..7***************..888889*************************9974 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MGVTCCESAF SKHLKGINQE HAILRRAGKK WRVKVNGRLL GEGWAKFVEE HDLQLGDLLI  60
FRHEGAMEFE VSIFDSNQFE REYEQTPEGV NEAGEEINHN CKFTSQDLRA NASNASLQPE  120
GKKPNLDDKR VSSRRKEANV LASTSANADS QFVTIIKPYA VIRALVYLPS AFARPNGLMR  180
RCKMILRDEK QRSWSVQLGS VGPRFGITRG WRQFREANAV QLGDTYKFEL IDNGTIPVAY  240
FCYILRDEKQ RSWPMLLVPM GHHVAISRGW RQLREANNVQ IGDPYKVELV KNGIIPIAVS  300
HCKYSGKEKS AAGDVQGKQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.15e-26B3 family protein