PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT44534.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 186aa MW: 21614.9 Da PI: 4.3615 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 39.9 | 9.9e-13 | 9 | 52 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W+ +Ed +l++ + +lG g+W++ ar g R+++++k++w++ PHT44534.1 9 KGPWSSDEDSKLIHSISLLGQGRWDSLARFAG--RSDNDVKNYWRT 52 79*****************************8..**********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MEASMEMKKG PWSSDEDSKL IHSISLLGQG RWDSLARFAG RSDNDVKNYW RTKVQKHAKE 60 LHCDVNNSHQ FRHFLLYQWL PSLLAQQISL TTPPSSEIMT ENNSPNNTMT CPNADFISSP 120 QDDNTCYNIW NNLSSFEDEI NISHDYSVPT NDEYYCHNYW PTTPSQVLLP DEMLCLDDDM 180 DLWLFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06490.1 | 2e-22 | MYB family protein |