PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT44241.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NZZ/SPL
Protein Properties Length: 391aa    MW: 43296.6 Da    PI: 9.6563
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT44241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE246.6e-081821035190
      NOZZLE  35 irtetkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrlp........vpvdrgvvlqgfps........ 117
                  +t +  s  r+  sk aq+ +kkp  rgmgv +ler +++e+ k+  +   g t     +sn+   +         v vd g+      s        
  PHT44241.1  18 TQTMNTSSTTRRRSSKNAQK-KKKPPQRGMGVEQLERLRVQEQLKNSNIHI-GGTHHQYLSSNNFPNFSssasatggVGVDSGIY-----Snsilnssp 109
                 45667788999999999875.577889***************999875543.444434444444444331100111156666664.....333444577 PP

      NOZZLE 118 .........................slgssrilcggvgsgqvmidpvispwgfvetsatthelssisnpqmynass..nnrcdtcfkkkrl.dgdqnnv 188
                                           +gss   +    s     +  i  + fv+  +   +   i+n    n ss   +rc +c kkkr+ +gd+ n+
  PHT44241.1 110 lfqfpksivspsndffvqqkvvntgFIGSSATTVPTGPSIAFGNQSQIDLYRFVNPNSNNGKSKEIPNLFSNNNSScfSDRCSSCNKKKRMiNGDEMNI 208
                 7888888888888776666666555555555555444455555566778899******99999999999999998844589********9549999998 PP

      NOZZLE 189 vr 190
                   
  PHT44241.1 209 SM 210
                 65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MATSHHPILQ ENHQSRQTQT MNTSSTTRRR SSKNAQKKKK PPQRGMGVEQ LERLRVQEQL  60
KNSNIHIGGT HHQYLSSNNF PNFSSSASAT GGVGVDSGIY SNSILNSSPL FQFPKSIVSP  120
SNDFFVQQKV VNTGFIGSSA TTVPTGPSIA FGNQSQIDLY RFVNPNSNNG KSKEIPNLFS  180
NNNSSCFSDR CSSCNKKKRM INGDEMNISM ENMIREKEVS GTKSLFQNPY SLPSSRLEKA  240
VEIVAIHRKG NSSLSSDEGV VMEYDFFSEK NGNTNHTSCL GKTMKMMSAN NSPESSSVAA  300
PMGNINDGTG KLELFSLLTV SFDANYQFNF TLSLELSVYS ALFKFIVAVS SVRCYRAPYS  360
ALFKLLVAAQ NRFEVISVYE RVDFFCYHSI P