PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT43985.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 123aa MW: 14096 Da PI: 4.5516 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 30.7 | 7.5e-10 | 13 | 48 | 51 | 92 |
NF-YB 51 sdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 ++ c+ ++++d+lwa+ ++G+++yve l+ yl+kyr PHT43985.1 13 NEYCH------MTAKDILWAMNNVGLNNYVEFLTDYLQKYRR 48 44444......6899*************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 123 aa Download sequence |
MSYFIQRITI KGNEYCHMTA KDILWAMNNV GLNNYVEFLT DYLQKYRREN SMHYLRPTIV 60 PPSTPSSLIL PINSVPMMSY VYAQFSPNML LNDSVPAVMT NVRNENMVAE NDEDPDSSES 120 SSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G47670.2 | 2e-09 | NF-YB family protein |