PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT43829.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 177aa MW: 20722.3 Da PI: 6.5314 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.8 | 7.8e-18 | 17 | 69 | 5 | 57 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++++eq++ Le+ Fe+++++ +++ +L+k+lg++ rq+++W+qNrRa++k+ PHT43829.1 17 KRLNQEQVKLLEASFESTKKLELQKKLQLSKELGVPPRQISIWYQNRRARWKN 69 5689***********************************************95 PP | |||||||
2 | HD-ZIP_I/II | 100.2 | 1.9e-32 | 15 | 106 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rl++eqvklLE sFe+++kLe ++K +l++eLg+ prq+ +W+qnrRAR+k+++lE+dy+aL+ ++++ +e+ +Leke+e Lr el++ PHT43829.1 15 NKKRLNQEQVKLLEASFESTKKLELQKKLQLSKELGVPPRQISIWYQNRRARWKNQNLENDYNALQLKLENALSEKMQLEKETEFLRGELQR 106 69*************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MNSSFNSQNL QKYPNKKRLN QEQVKLLEAS FESTKKLELQ KKLQLSKELG VPPRQISIWY 60 QNRRARWKNQ NLENDYNALQ LKLENALSEK MQLEKETEFL RGELQRANEM LIAINSGAQG 120 QIREFSLSSS CCDQDVISYT STTWVHTDHE VNYNLQFDEL YAMIGVEEGS NKCYSTW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53980.1 | 2e-23 | HD-ZIP family protein |