PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT43730.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

STAT

Protein Properties

Length: 1004aa MW: 113237 Da PI: 6.5937

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT43730.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	179.1	6.6e-56	213	332	1	120
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypfle 99 ldv+l++ +++pv+ + ev+asL+y+d+ ++vek+ da+apLL+sydG+e++s+drp +++ GrasfklkisqLsskcdnrLfri+feipk+ kypf+e PHT43730.1 213 LDVTLMDNFSRPVTEEAEVIASLVYSDNETPVEKPVDADAPLLTSYDGIEYASSDRPNRIISGRASFKLKISQLSSKCDNRLFRIRFEIPKMGKYPFFE 311 89*********************************************************************************************** PP STAT 100 avskpirCisrsrntrssslt 120 ++s+pirCisr r+tr++sl+ PHT43730.1 312 VLSRPIRCISRIRSTRATSLM 332 **************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1004 aa Download sequence
MGVQDYSSLR DVHVEFKDFE VTNRFSLCFW FYLNDTSALP STILHQEHPD VTSHAPFLLL 60 DEKKKILLFP SLISNCSNVT SWREVAHATS ECAFPTKKWV HVGCEVTQDL LHLYFDGKIV 120 GEKSLASSLT NDTGPVNSRI SLTCISGKDS QLDGYVHNPE LFPVVSTIKN HYVKDPPVQL 180 SIDNSSAYEI EEDSDGVWSI VGGKASCRRN FSLDVTLMDN FSRPVTEEAE VIASLVYSDN 240 ETPVEKPVDA DAPLLTSYDG IEYASSDRPN RIISGRASFK LKISQLSSKC DNRLFRIRFE 300 IPKMGKYPFF EVLSRPIRCI SRIRSTRATS LMLRKSSLGI HLLNGSQSPV LEDGSSDLPC 360 IVHEAKLSPS SKRVKLGQEK LCANFKDVQQ PNGGSRSHSW TSEDNYAYQN SLVARPVSQD 420 GAENFSSDSE DSEATNSAID DLPNDSGPIS DLVVFKYCLA DLNERRLLLK EMTMTAKEEL 480 ATFAERVSLF SGCSHHRLQI SISKRLIEEG IKCWNLISNN HHHVLWENLV SGLQEHFLKM 540 TFGRTRSLTL QDFNLLRRVS GCQDLVSQDN FEKLWCWLYP VAFTVSQKCI SSLWGSTSPM 600 WIEGFITKEE AESSLRNLVA LQEPGELTRT PLLLDAPKLE IFLTSLNDFD LRALHDYLWT 660 KEYLLVALLA GCFKKMSPSC NKVLRWKRKQ MVVQDSLSGG KLVMFKSPKM NTLKSNVFLK 720 RTMKLTNKDI IGSGGYGTVY KLTMNESISF AIKRLNRISA EQDRGFEREL EAMGDIKHRN 780 IVTLHGYYST TQYNLLIYEL MTNGSLDEVL HGKSAARKTL DWPSRYKIAL GAARGLSYLH 840 HDCIPHIIHR DIKSSNILLD HNMEARVSDF GLATLMEPDK THVSTLVAGT FGYLAPEYFD 900 TGKATVKGDV YSFGVVLLEL LTGRKPTDEA FLEEGTKLVT WVKTVVQEKR EEYVLDKNLE 960 EFPIDEINHV FNIALMCLES DPCKRPTMAE VVTMLEQIKI NALA

Sequence ? help Back to Top

Protein Sequence Length: 1004 aa Download sequence

MGVQDYSSLR DVHVEFKDFE VTNRFSLCFW FYLNDTSALP STILHQEHPD VTSHAPFLLL  60
DEKKKILLFP SLISNCSNVT SWREVAHATS ECAFPTKKWV HVGCEVTQDL LHLYFDGKIV  120
GEKSLASSLT NDTGPVNSRI SLTCISGKDS QLDGYVHNPE LFPVVSTIKN HYVKDPPVQL  180
SIDNSSAYEI EEDSDGVWSI VGGKASCRRN FSLDVTLMDN FSRPVTEEAE VIASLVYSDN  240
ETPVEKPVDA DAPLLTSYDG IEYASSDRPN RIISGRASFK LKISQLSSKC DNRLFRIRFE  300
IPKMGKYPFF EVLSRPIRCI SRIRSTRATS LMLRKSSLGI HLLNGSQSPV LEDGSSDLPC  360
IVHEAKLSPS SKRVKLGQEK LCANFKDVQQ PNGGSRSHSW TSEDNYAYQN SLVARPVSQD  420
GAENFSSDSE DSEATNSAID DLPNDSGPIS DLVVFKYCLA DLNERRLLLK EMTMTAKEEL  480
ATFAERVSLF SGCSHHRLQI SISKRLIEEG IKCWNLISNN HHHVLWENLV SGLQEHFLKM  540
TFGRTRSLTL QDFNLLRRVS GCQDLVSQDN FEKLWCWLYP VAFTVSQKCI SSLWGSTSPM  600
WIEGFITKEE AESSLRNLVA LQEPGELTRT PLLLDAPKLE IFLTSLNDFD LRALHDYLWT  660
KEYLLVALLA GCFKKMSPSC NKVLRWKRKQ MVVQDSLSGG KLVMFKSPKM NTLKSNVFLK  720
RTMKLTNKDI IGSGGYGTVY KLTMNESISF AIKRLNRISA EQDRGFEREL EAMGDIKHRN  780
IVTLHGYYST TQYNLLIYEL MTNGSLDEVL HGKSAARKTL DWPSRYKIAL GAARGLSYLH  840
HDCIPHIIHR DIKSSNILLD HNMEARVSDF GLATLMEPDK THVSTLVAGT FGYLAPEYFD  900
TGKATVKGDV YSFGVVLLEL LTGRKPTDEA FLEEGTKLVT WVKTVVQEKR EEYVLDKNLE  960
EFPIDEINHV FNIALMCLES DPCKRPTMAE VVTMLEQIKI NALA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17040.1	1e-155	STAT family protein