PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43547.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 270aa    MW: 29251.3 Da    PI: 5.9649
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY955.3e-3076133359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY ++Hnh+
  PHT43547.1  76 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRLDPTMLLITYCSDHNHQ 133
                 99************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MEDRLYKSSF FHKQEDSTGT PLDNAADSCF SGDEAAEVNM PSPRKSRRGA KRKVISVPII  60
EADGSRSKGE VYPPPDSWSW RKYGQKPIKG SPYPRGYYRC SSSKGCPARK QVERSRLDPT  120
MLLITYCSDH NHQLPAATAT KHHHTTAAAA AATSPSTSTG TAVDINPSVA SDTAKKSSPE  180
EQETNIFAGF SEFAGELGWF SDMGTSTLMD SASTSATSIV GSTWNDSDVA LMLPIREEDQ  240
SLYGDLGELP ECSFVFRRYS VETTCCGGTG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14753RRGAKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.14e-62WRKY family protein