PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT43537.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 307aa MW: 35002.6 Da PI: 6.805

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT43537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	114.5	1.4e-35	22	131	2	105
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssasec.....eaesssssasnsssg.k 89 +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak ai++l ++ + ++ ea++ + ++++++ + + PHT43537.1 22 TGRKDRHSKVYTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDKLDELppwnpN-----QVpstteEADDAVLEQQQPEYQlR 115 79**************************************************************766642.....222222455555666665555542 PP TCP 90 aaksaakskksqksaa 105 ++ ++++++++ +s++ PHT43537.1 116 RELEENNPSHQVNSSN 131 2222223333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MKRATGGGEI VQVEGGHILR STGRKDRHSK VYTAKGPRDR RVRLAAHTAI QFYDVQDRLG 60 YDRPSKAVDW LIKKAKNAID KLDELPPWNP NQVPSTTEEA DDAVLEQQQP EYQLRRELEE 120 NNPSHQVNSS NSYMMQVPST GGEAPQSLGD TMKSFFPMNS GTPLMNFQNY PHEIMPRSSL 180 QNEDLGLSLH TTFHRATSSD NDQNALFSNH QNFEANYPRM ASWNILPQTF FTTQSAFTQR 240 EPLQSNFSQM INHHATWEER PLMNGLIHQA EITNNSRHFT TDFQVPARIH GEHHQDPSSA 300 SPNSHHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-51	TCP family protein